Dear list, There is, I believe, a minor typo in the example section of influence.measures.Rd. In the final example the word `does` appears where I suspect `dose` is required: I couldn't remember exactly what format patches should be in, so here is one as diff would produce: Index: devel/src/library/stats/man/influence.measures.Rd ==================================================================198c198 < yi <- c(0,2,14,19,30) # number of mice responding to does xi ---> yi <- c(0,2,14,19,30) # number of mice responding to dose xi####### and this version is provided by svn diff: Index: devel/src/library/stats/man/influence.measures.Rd ==================================================================--- devel/src/library/stats/man/influence.measures.Rd (revision 54122) +++ devel/src/library/stats/man/influence.measures.Rd (working copy) @@ -195,7 +195,7 @@ ## Irwin's data [Williams 1987] xi <- 1:5 -yi <- c(0,2,14,19,30) # number of mice responding to does xi +yi <- c(0,2,14,19,30) # number of mice responding to dose xi mi <- rep(40, 5) # number of mice exposed summary(lmI <- glm(cbind(yi, mi -yi) ~ xi, family = binomial)) signif(cooks.distance(lmI), 3)# ~= Ci in Table 3, p.184 ####### Both are against the R svn trunk, r54122, and are attached, but may not make it through the mailing list filters. All the best, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http://www.freshwaters.org.uk %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% -------------- next part -------------- A non-text attachment was scrubbed... Name: influence.measures.Rd.diff-patched Type: text/x-patch Size: 263 bytes Desc: not available URL: <https://stat.ethz.ch/pipermail/r-devel/attachments/20110127/cb594ac5/attachment.bin> -------------- next part -------------- A non-text attachment was scrubbed... Name: influence.measures.Rd.patched Type: text/x-patch Size: 624 bytes Desc: not available URL: <https://stat.ethz.ch/pipermail/r-devel/attachments/20110127/cb594ac5/attachment-0001.bin>
The preferred form is a diff -u as a text attachment. svn diff is basically diff -u, but has the advantage of telling us exactly what version was diff-ed against. But for something as simple as this, inline is fine, thanks. [The main reason for wanting an attachment is that once lines get wrapped or tabs expanded, the noise can far exceed the signal.] On Thu, 27 Jan 2011, Gavin Simpson wrote:> Dear list, > > There is, I believe, a minor typo in the example section of > influence.measures.Rd. In the final example the word `does` appears > where I suspect `dose` is required: > > I couldn't remember exactly what format patches should be in, so here is > one as diff would produce: > > Index: devel/src/library/stats/man/influence.measures.Rd > ==================================================================> 198c198 > < yi <- c(0,2,14,19,30) # number of mice responding to does xi > --- >> yi <- c(0,2,14,19,30) # number of mice responding to dose xi > > ####### > and this version is provided by svn diff: > > Index: devel/src/library/stats/man/influence.measures.Rd > ==================================================================> --- devel/src/library/stats/man/influence.measures.Rd (revision 54122) > +++ devel/src/library/stats/man/influence.measures.Rd (working copy) > @@ -195,7 +195,7 @@ > > ## Irwin's data [Williams 1987] > xi <- 1:5 > -yi <- c(0,2,14,19,30) # number of mice responding to does xi > +yi <- c(0,2,14,19,30) # number of mice responding to dose xi > mi <- rep(40, 5) # number of mice exposed > summary(lmI <- glm(cbind(yi, mi -yi) ~ xi, family = binomial)) > signif(cooks.distance(lmI), 3)# ~= Ci in Table 3, p.184 > > ####### > Both are against the R svn trunk, r54122, and are attached, but may not > make it through the mailing list filters. > > All the best, > > Gavin > -- > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% > Dr. Gavin Simpson [t] +44 (0)20 7679 0522 > ECRC, UCL Geography, [f] +44 (0)20 7679 0565 > Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk > Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ > UK. WC1E 6BT. [w] http://www.freshwaters.org.uk > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% >-- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595
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